Coding 初學指南附錄 - Bioinfo Practices using Python

A walk through of practices created by Rosalind Team.

Plot Sequencing Depth with Gviz

TL;DR Plot exome sequencing depth and coverage with genome annotation using Gviz in R. Then apply detail control on Gviz annotation track displaying.

This is an extending post from Genomic Data Processing in Bioconductor, though I haven’t finished reading all the reference in that post. The background knowledge …

Overview of Genomic Data Processing in Bioconductor

Notes of fundamental tools and learning resources for handling genomic data in R with Bioconductor.

FASTA/Q sequence processing toolkit -- seqtk

This post demonstrates the FASTQ to FASTA conversion and sequence quality check using seqtk.